BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H07LP1|AL427538
(210 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig176 231 3e-61
>3x_Contig176
Length = 1086
Score = 231 bits (116), Expect = 3e-61
Identities = 136/146 (93%)
Strand = Plus / Plus
Query: 3 cctaatcaaatccgtacaccacatacctaatcaaatccgtacaccaacgccctcatcttt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctaatcaaatccgtacaccacatacctaatcaaatccgtacaccaacgccctcatcttt 323
Query: 63 ttcacttttctccattaccctgccctttcttttgncttntcckcccctcncntttccttn 122
|||||||||||||||||||||||||||||||||| ||| ||| |||||| | |||||||
Sbjct: 324 ttcacttttctccattaccctgccctttcttttgacttatcctcccctcacatttcctta 383
Query: 123 ccctncccntttctcttgtgttnccc 148
|||| ||| ||||||| ||||| |||
Sbjct: 384 ccctacccatttctctagtgttaccc 409
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1269
Number of Sequences: 1807
Number of extensions: 1269
Number of successful extensions: 221
Number of sequences better than 1.0e-20: 1
length of query: 210
length of database: 10,358,551
effective HSP length: 15
effective length of query: 195
effective length of database: 10,331,446
effective search space: 2014631970
effective search space used: 2014631970
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.3 bits)